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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4232548_4232859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4232548 - 4232859

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTACT

5'SS Class:

major

3'SS Sequence:

CTGCTTATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATGTCTTAATT

Flanking Amino Acid:

AGSDGKPGPPGNQGEPGRSG

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

71.2

38.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.7

0.53

0.9

65.6

39.7

Minor 5ss

46.7

-0.3

2.5

66.6

37.9

Minor BPS

67.6

0.63

1.4

76.1

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761

ENSAPLT00000027431

4218405 - 4267822

49418