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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4234097_4234213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4234097 - 4234213

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

ATTGCCTTCATG

Flanking Amino Acid:

PGSNGLPGEKGPAGERGQDG

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.1

33.2

Major BPS

75.8

0.64

65.8

Major PPT

86.8

0.83

0.7

86.1

27.7

Minor 5ss

41.1

-1

3.4

58.5

46.3

Minor BPS

57.1

0.08

1.9

65.25

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761