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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4234268_4235480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4234268 - 4235480

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TTTTATTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTGCCTAAAAT

Flanking Amino Acid:

NGVPGTPGERGSPGFRGLPG

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

63.2

43.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.2

0.86

0.7

83.7

30.9

Minor 5ss

37.7

-1.4

42.7

44.4

Minor BPS

64.7

0.54

1.9

85.06

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761

ENSAPLT00000027431

4218405 - 4267822

49418