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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4236576_4236699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236576 - 4236699

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTACT

5'SS Class:

major

3'SS Sequence:

TGGCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGGCTCTCCACA

Flanking Amino Acid:

AGSPGNKGEMGPSGIPGAPG

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

73.2

37.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

71.4

0.48

0.9

64.9

36.5

Minor 5ss

31.7

-2.1

39.7

40.1

Minor BPS

46.2

-0.3

1.9

57.45

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761