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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4236967_4237263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236967 - 4237263

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCAGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AATGCATTAATT

Flanking Amino Acid:

AGFPGSPGFKGEAGPPGPAG

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.6

43.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

88.3

0.86

0.6

89.2

19.7

Minor 5ss

45.9

-0.4

2.6

61.2

43.2

Minor BPS

62.5

0.47

1.7

76.94

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761