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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4241307_4242011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4241307 - 4242011

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

IGPAGPPGKDGEPGRPGRNG

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

79.7

Major BPS

0.5

0.9

61.4

35.9

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

42.9

-0.8

2.7

55.2

42.1

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761