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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4242340_4242883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4242340 - 4242883

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TGCTGCATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

CACATCTTAACT

Flanking Amino Acid:

PGPPGHAGPPGSNGYQGPPG

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

82.3

0.8

83.6

25.8

Major PPT

69.4

0.44

0.9

62.8

38.4

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

66.6

0.6

1.4

73.25

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761