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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4245878_4248100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4245878 - 4248100

Intron Length:

2223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

ATTTCTTTTACA

Flanking Amino Acid:

CQSCPSINGGSFSPQYDSYD

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

70.9

40.9

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

89.6

0.89

0.7

84.2

Minor 5ss

37.9

-1.4

3.1

51.1

45.2

Minor BPS

0.72

1.5

81.53

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000002527

4218405 - 4267165

48761