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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4248824_4250899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4248824 - 4250899

Intron Length:

2076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTTTCTTAATT

Flanking Amino Acid:

CPQTTPQPTKPPVHQGPRGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

86.1

0.81

0.7

80.2

31.9

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

83.9

1.14

91.07

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761

ENSAPLT00000027431

4218405 - 4267822

49418