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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4828068_4828746_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4828068 - 4828746

Intron Length:
679

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
TTATGATCCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATGATCC

Flanking Amino Acid:
KEHKQFPRFFVMQEETRNSW

Intron Amino Acid Position:
241

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.3
0.83
0.9
79.9
32.8

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
72.6
0.51
0.9
65.8
39.8

Minor 5ss
36.3
-1.6
3
48
41.5

Minor BPS
51.6
0.03
2
72.25
38.5

Associated Gene:

Gene:
TFPI

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4808622 - 4828859
20238