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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4882604_4888287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4882604 - 4888287

Intron Length:

5684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTGTATTCATTT

Flanking Amino Acid:

LISLGIFFYFKSLSCQRITL

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

86.8

0.83

0.6

80.7

31.3

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

45.1

-0.2

1.9

61.67

42.7

Associated Gene:

Gene:

CALCRL

Ensembl Gene ID:

ENSAPLG00000003509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003622

4876413 - 4903680

27268