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Intron Name: Anas_platyrhynchos_platyrhynchos_7_489631_490668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

489631 - 490668

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TTTCTCTTATTT

Flanking Amino Acid:

VEEFTRGAKQAFSVVSQLLS

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

68.2

0.65

1.5

84.89

35.8

Associated Gene:

Gene:

MAIP1

Ensembl Gene ID:

ENSAPLG00000008514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038538

484766 - 495385

10620

ENSAPLT00000008846

484766 - 492256

7491