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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5066468_5066780_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5066468 - 5066780

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TCTGCAGTCACT

Flanking Amino Acid:

GFFAVLLCYCRDKCGRTQKK

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

79.1

0.66

0.8

80.4

31.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

43.3

-0.4

2.6

68.33

48.3

Associated Gene:

Gene:

FAM171B

Ensembl Gene ID:

ENSAPLG00000004087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004194

5065132 - 5092964

27833