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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5102336_5102716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5102336 - 5102716

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGAATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTCCTCTGAATT

Flanking Amino Acid:

LAVLVLVMYRMGFFKRVRPP

Intron Amino Acid Position:

1014

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

84.4

33.5

Major BPS

0.62

1.1

77.2

Major PPT

69.2

0.43

0.9

62.1

37.7

Minor 5ss

37.9

-1.4

2.7

44.7

42.7

Minor BPS

63.9

0.52

1.4

77.82

38.8

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495