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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5102840_5103867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5102840 - 5103867

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATGTCTTTAATT

Flanking Amino Acid:

SFEDIHNSTVVTTNITWGIQ

Intron Amino Acid Position:

973

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

76.1

0.59

0.8

76.1

27.7

Minor 5ss

-1.6

47.1

42.6

Minor BPS

79.4

85.93

34.5

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495