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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5105236_5106035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5105236 - 5106035

Intron Length:

800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGATGTATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

GTTTCCTTGATG

Flanking Amino Acid:

DMEINPLKIKISTSKDDDKN

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

64.1

0.32

55.4

44.4

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

76.6

0.69

1.2

75.4

36.6

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495