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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5109646_5110414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5109646 - 5110414

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TTCCACTGAACC

Flanking Amino Acid:

LGNPMKAGTKLLAGLRFSVH

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

0.3

34.1

Major PPT

84.5

0.78

0.9

87.3

23.6

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

58.7

0.25

1.7

70.21

40.5

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495