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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5110508_5111017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5110508 - 5111017

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTCTTATTT

Flanking Amino Acid:

DFIGVVRNNEALARLSCAFK

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

36.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.97

0.7

88.8

27.4

Minor 5ss

40.9

-1

3.2

55.7

48.5

Minor BPS

68.9

0.67

1.5

82.89

39.2

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495