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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5112485_5113971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5112485 - 5113971

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CACGCTTTAATT

Flanking Amino Acid:

NCEELDAFLRDESEFRDKLT

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.9

0.65

0.9

77.2

37.1

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

61.2

0.43

1.4

68.01

43.8

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495