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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5114127_5115133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5114127 - 5115133

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTGGATTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ATATCCCTAATC

Flanking Amino Acid:

DGKGKLPNSLNFQVELLLDK

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

32.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

61.2

0.25

1.2

47.3

Minor 5ss

48.3

-0.1

2.8

72.9

37.4

Minor BPS

66.8

0.51

1.6

74.81

35.3

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495