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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5120555_5120654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5120555 - 5120654

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAAAT

5'SS Class:

major

3'SS Sequence:

TTCTCACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ATTTTCTCACAT

Flanking Amino Acid:

VPRAARTLGMVSIYNGKNMS

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

73.4

37.3

Major BPS

0.87

0.8

85.6

Major PPT

76.3

0.59

0.9

70.7

Minor 5ss

33.9

-1.8

3.3

45.4

Minor BPS

52.1

0.15

1.9

75.64

40.8

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495