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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5120699_5120899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5120699 - 5120899

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGGATGTTAACC

Flanking Amino Acid:

VGDFSGDGIEDFVSGVPRAA

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

84.2

0.77

0.8

81.4

34.9

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

50.5

-0

2.1

63.26

42.2

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495