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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5125358_5126798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5125358 - 5126798

Intron Length:

1441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ATAATCTGATTT

Flanking Amino Acid:

KSVEYAPCRSTTIDADGQGF

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

91.3

0.93

0.6

88.5

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

47.9

-0

1.7

64.72

39.7

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495