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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5127502_5139445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5127502 - 5139445

Intron Length:

11944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

ATTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCCCATGAAAT

Flanking Amino Acid:

NCQPIIFDSTGNRDFAPDDP

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.2

0.77

0.8

82.6

33.5

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

51.1

0.11

1.9

73.47

42.4

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495