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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5139574_5141552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5139574 - 5141552

Intron Length:

1979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

CTTTTTACCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGTTTTGAAACT

Flanking Amino Acid:

AVDFFAPDSSSISLLVGAPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.3

62.4

42.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

82.2

0.72

0.8

77.8

29.4

Minor 5ss

34.5

-1.8

3.1

42.3

38.8

Minor BPS

47.3

-0.1

2.2

69.96

41.5

Associated Gene:

Gene:

ITGAV

Ensembl Gene ID:

ENSAPLG00000006402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006802

5102240 - 5141734

39495