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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5327303_5330750_F

Intron Information:

Intron Rank:

123299

Intron Class:

major

Intron Phase:

Intron Coordinates:

5327303 - 5330750

Intron Length:

3448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTTCTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.4

0.86

0.7

83.2

25.3

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

73.5

0.82

1.5

87.15

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018348

5324224 - 5364899

40676