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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5330828_5364670_F

Intron Information:

Intron Rank:

123300

Intron Class:

major

Intron Phase:

Intron Coordinates:

5330828 - 5364670

Intron Length:

33843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

71.5

38.6

Major BPS

100

1.24

0.5

100

Major PPT

80.9

0.69

0.8

76.8

Minor 5ss

41.6

-0.9

2.7

43.2

Minor BPS

61.2

0.35

1.9

78.83

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018348

5324224 - 5364899

40676