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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5373142_5375929_R

Intron Information:

Intron Rank:

151888

Intron Class:

major

Intron Phase:

Intron Coordinates:

5373142 - 5375929

Intron Length:

2788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCATCATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATTTCCATCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

70.6

41.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.2

0.59

0.9

69.6

35.2

Minor 5ss

38.6

-1.3

3.2

44.2

Minor BPS

60.1

0.4

83.35

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032184

5367710 - 5376124

8415