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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5397732_5398629_F

Intron Information:

Intron Rank:

123310

Intron Class:

major

Intron Phase:

Intron Coordinates:

5397732 - 5398629

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

CTATGTTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTCTTCCTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

67.2

0.39

0.9

66.1

39.7

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

47.5

-0.1

2.2

71.67

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032918

5397383 - 5399432

2050