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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5419499_5419951_F

Intron Information:

Intron Rank:

123302

Intron Class:

major

Intron Phase:

Intron Coordinates:

5419499 - 5419951

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

GTTAATCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTATGTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

77.9

31.1

Major BPS

84.4

0.85

34.5

Major PPT

68.3

0.41

59.7

45.6

Minor 5ss

36.4

-1.5

2.9

48.3

41.8

Minor BPS

59.1

0.26

2.1

74.32

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029559

5397383 - 5435526

38144

ENSAPLT00000022360

5392833 - 5435526

42694

ENSAPLT00000032629

5364527 - 5420019

55493