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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5501047_5528925_F

Intron Information:

Intron Rank:

141323

Intron Class:

major

Intron Phase:

Intron Coordinates:

5501047 - 5528925

Intron Length:

27879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TAATATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ATTTTGTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

77.1

37.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

0.63

0.9

74.3

40.6

Minor 5ss

39.9

-1.1

2.8

53.6

37.3

Minor BPS

70.5

0.72

89.83

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046992

5501030 - 5529006

27977