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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5637749_5640319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5637749 - 5640319

Intron Length:

2571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATCT

Flanking Amino Acid:

KLAELRKETTCAPGSGPMFK

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.3

0.68

0.8

73.7

36.7

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

64.5

0.53

87.39

38.7

Associated Gene:

Gene:

ZNF804A

Ensembl Gene ID:

ENSAPLG00000026720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030181

5634445 - 5704597

70153

ENSAPLT00000023531

5634445 - 5723160

88716