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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5640451_5668138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5640451 - 5668138

Intron Length:

27688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTGTATTTGACT

Flanking Amino Acid:

INSYDHAHKQRLKELKQREF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.6

0.73

0.9

76.9

35.8

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

63.1

0.49

1.5

76.66

40.1

Associated Gene:

Gene:

ZNF804A

Ensembl Gene ID:

ENSAPLG00000026720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023531

5634445 - 5723160

88716

ENSAPLT00000030181

5634445 - 5704597

70153