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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5778471_5779174_F

Intron Information:

Intron Rank:

138612

Intron Class:

major

Intron Phase:

Intron Coordinates:

5778471 - 5779174

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGCT

5'SS Class:

strong_major

3'SS Sequence:

ATCCCTGCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCTACCGGGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

36.4

Major BPS

0.62

1.4

85.7

34.9

Major PPT

60.6

0.24

1.1

59.4

35.4

Minor 5ss

31.2

-2.1

3.7

47.6

Minor BPS

42.5

-0.6

2.1

50.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047404

5778145 - 5780605

2461