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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5779351_5780510_F

Intron Information:

Intron Rank:

138613

Intron Class:

major

Intron Phase:

Intron Coordinates:

5779351 - 5780510

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ATTCTCTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

81.1

0.7

0.8

77.8

30.2

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

60.6

0.31

1.5

69.76

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047404

5778145 - 5780605

2461