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Intron Name: Anas_platyrhynchos_platyrhynchos_7_5821424_5835069_R

Intron Information:

Intron Rank:

155398

Intron Class:

major

Intron Phase:

Intron Coordinates:

5821424 - 5835069

Intron Length:

13646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGA

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

AGTTAGTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

43.8

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

93.7

0.98

0.6

92.5

17.4

Minor 5ss

37.4

-1.4

3.1

48.6

47.2

Minor BPS

46.8

-0.3

2.3

57.23

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036025

5737366 - 5835374

98009