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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6029476_6038473_R

Intron Information:

Intron Rank:

133149

Intron Class:

major

Intron Phase:

Intron Coordinates:

6029476 - 6038473

Intron Length:

8998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AGCATTTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

81.2

0.7

0.8

80.5

31.5

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

49.2

0.02

1.6

62.86

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030831

6029125 - 6051626

22502