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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6109387_6109764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6109387 - 6109764

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

CAACTCATAATT

Flanking Amino Acid:

QLDDTWVTVFGFPQASASYI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

0.08

1.6

64.2

Associated Gene:

Gene:

NUP35

Ensembl Gene ID:

ENSAPLG00000009161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009564

6103871 - 6114692

10822