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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6110566_6112191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6110566 - 6112191

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTTTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTTTTTAATG

Flanking Amino Acid:

GSTPLTSRRPASFSLTQSPL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.7

0.67

74.8

38.9

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

65.3

0.34

1.3

62.99

39.9

Associated Gene:

Gene:

NUP35

Ensembl Gene ID:

ENSAPLG00000009161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009564

6103871 - 6114692

10822