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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6112320_6114090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6112320 - 6114090

Intron Length:

1771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCGCT

5'SS Class:

major

3'SS Sequence:

CTTTTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCCTTTTAATT

Flanking Amino Acid:

VMEMRSPLLAGGSPPQPVVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.3

69.7

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.76

0.8

78.3

33.7

Minor 5ss

34.4

-1.8

3.3

48.5

47.2

Minor BPS

0.58

1.2

74.8

36.5

Associated Gene:

Gene:

NUP35

Ensembl Gene ID:

ENSAPLG00000009161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009564

6103871 - 6114692

10822