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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6165955_6166454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6165955 - 6166454

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TGAACTTCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGATTGTGAACT

Flanking Amino Acid:

SLDAMEKWIIFGFILCHGVL

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

30.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

61.4

0.26

1.1

60.7

40.2

Minor 5ss

32.2

-2

2.7

39.2

40.5

Minor BPS

51.5

0.13

2.2

74.32

42.1

Associated Gene:

Gene:

NCKAP1

Ensembl Gene ID:

ENSAPLG00000008045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008477

6150360 - 6170064

19705