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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6167918_6168141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6167918 - 6168141

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTATGATTATTT

Flanking Amino Acid:

SDQPGLLGPKALFVFMALSF

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

84.6

0.86

41.2

Major PPT

93.1

0.97

0.7

92.4

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

48.6

-0

2.2

73.9

43.1

Associated Gene:

Gene:

NCKAP1

Ensembl Gene ID:

ENSAPLG00000008045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008477

6150360 - 6170064

19705