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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6330628_6353062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6330628 - 6353062

Intron Length:

22435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.5

45.8

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

28.7

-2.4

3.4

37.1

47.5

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043863

6330562 - 6435627

105066