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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6353123_6374629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6353123 - 6374629

Intron Length:

21507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACCT

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTGTCGTTACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

70.8

39.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

72.4

0.5

64.3

41.5

Minor 5ss

40.7

-1

3.1

57.7

46.5

Minor BPS

44.6

-0.5

2.4

53.08

47.3

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565

ENSAPLT00000043863

6330562 - 6435627

105066