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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6407382_6407630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6407382 - 6407630

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGATCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATTA

Flanking Amino Acid:

DTDSLWADTQDDDRSIMTEQ

Intron Amino Acid Position:

1412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

79.6

35.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.7

0.6

0.9

69.2

36.8

Minor 5ss

-0.4

2.8

65.5

45.8

Minor BPS

57.8

0.24

74.5

38.1

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565