Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_6407838_6408229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6407838 - 6408229

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCATTTA

5'SS Class:

major

3'SS Sequence:

TTCTTGTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTCTCCTGATT

Flanking Amino Acid:

LSRDEVRRKKAVYKKAELAK

Intron Amino Acid Position:

1481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.4

1.2

69.7

37.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

76.8

0.6

0.8

72.4

32.4

Minor 5ss

38.4

-1.3

3.1

50.3

Minor BPS

59.7

0.39

1.6

80.99

34.3

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565