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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6408365_6411717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6408365 - 6411717

Intron Length:

3353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGCA

5'SS Class:

major

3'SS Sequence:

TTGGGTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTATTTTTAACC

Flanking Amino Acid:

HLSCVKRKQTAAGGETNQAP

Intron Amino Acid Position:

1526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

71.1

34.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

72.9

0.52

69.5

41.7

Minor 5ss

33.1

-1.9

3.1

41.6

Minor BPS

79.9

0.92

82.59

30.6

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565