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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6411780_6417308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6411780 - 6417308

Intron Length:

5529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTGTTGCTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

VFKQAKEKLSDGVSKSPEKR

Intron Amino Acid Position:

1547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.7

0.49

71.3

39.6

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043863

6330562 - 6435627

105066

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565