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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6417463_6419083_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6417463 - 6419083

Intron Length:

1621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTGCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

ATTTCTGTGAGT

Flanking Amino Acid:

SLSSSVRRTTRSEPIRSRTG

Intron Amino Acid Position:

1598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.3

71.8

40.5

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

74.6

0.55

0.9

70.3

35.4

Minor 5ss

64.3

0.48

2.2

79.9

33.6

Minor BPS

49.8

0.07

2.3

76.71

40.5

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043863

6330562 - 6435627

105066

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565