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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6433266_6433988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6433266 - 6433988

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCAG

5'SS Class:

major

3'SS Sequence:

TTTTTCTGTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAC

U12 Branch Point Sequence:

TTTCCTTTTTCT

Flanking Amino Acid:

GSLKNIHHKPGGGRVKIESV

Intron Amino Acid Position:

1740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

60.5

45.8

Major BPS

58.6

0.21

1.2

70.2

35.9

Major PPT

83.9

0.76

0.8

81.4

30.6

Minor 5ss

35.6

-1.6

3.3

46.7

48.6

Minor BPS

-0.3

3.6

81.46

40.1

Associated Gene:

Gene:

MAP2

Ensembl Gene ID:

ENSAPLG00000022767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043863

6330562 - 6435627

105066

ENSAPLT00000035821

6353063 - 6435627

82565

ENSAPLT00000028505

6353063 - 6435627

82565